Plant Evolutionary Cell Biology
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Fürtauer, L., Küstner, L., Weckwerth, W., Heyer, A.G. and Nägele, T. (2019) Resolving subcellular plant metabolism. THE PLANT JOURNAL, DOI: https://doi.org/10.1111/tpj.14472

Küstner, L., Fürtauer, L., Weckwerth, W., Nägele, T. and Heyer, A.G. (2019) Subcellular dynamics of proteins and metabolites under abiotic stress reveal deferred response of the Arabidopsis thaliana hexokinase-1 mutant gin2-1 to high light. THE PLANT JOURNAL, DOI: https://doi.org/10.1111/tpj.14491

Fürtauer L, Pschenitschnigg A, Scharkosi H, Weckwerth W, Nägele T (2018) Combined multivariate analysis and machine learning reveals a predictive module of metabolic stress response in Arabidopsis thaliana. MOLECULAR OMICS 14,437-449. DOI: http://dx.doi.org/10.1039/C8MO00095F

Weiszmann J, Fürtauer L, Weckwerth W, Nägele T (2018) Vacuolar sucrose cleavage prevents limitation of cytosolic carbohydrate metabolism and stabilizes photosynthesis under abiotic stress. THE FEBS JOURNAL 285,4082-4098. DOI: https://doi.org/10.1111/febs.14656

Lisa Fürtauer, Jakob Weiszmann, Wolfram Weckwerth and Thomas Nägele: Mathematical modelling approaches in plant metabolomics. In: António C ed. Plant Metabolomics: Methods and Protocols. New York, NY: Springer New York, 329-347. DOI: https://doi.org/10.1007/978-1-4939-7819-9_24

Pedrotti L, Weiste C, Nägele T, Wolf E, Lorenzin F, Dietrich K, Mair A, Weckwerth W, Teige M, Baena-González E, et al. (2018) Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. THE PLANT CELL 30, 495-509. DOI: https://doi.org/10.1105/tpc.17.00414

Hoermiller, II, Naegele, T., Augustin, H., Stutz, S., Weckwerth, W., and Heyer, A.G. (2017). Subcellular reprogramming of metabolism during cold acclimation in Arabidopsis thaliana. PLANT, CELL AND ENVIRONMENT 40, 602-610 DOI: https://doi.org/10.1111/pce.12836

Fürtauer, L., Weckwerth, W., and Nägele, T. (2016). A Benchtop Fractionation Procedure for Subcellular Analysis of the Plant Metabolome. FRONTIERS IN PLANT SCIENCE 7, 1912. DOI: https://doi.org/10.3389/fpls.2016.01912

Lisa Fürtauer and Thomas Nägele (2016): Approximating the stabilization of cellular metabolism by compartmentalization, THEORY IN BIOSCIENCES, 135: 73. DOI: https://doi.org/10.1007/s12064-016-0225-y

Ella Nukarinen, Thomas Nägele, Lorenzo Pedrotti, Bernhard Wurzinger, Andrea Mair, Ramona Landgraf, Frederik Börnke, Johannes Hanson, Markus Teige, Elena Baena-Gonzalez, Wolfgang Dröge-Laser, Wolfram Weckwerth (2016). Quantitative phosphoproteomics reveals the role of the AMPK plant ortholog SnRK1 as a metabolic master regulator under energy deprivation, SCIENTIFIC REPORTS 6:31697. DOI: https://doi.org/10.1038/srep31697

Matthias Nagler, Ella Nukarinen, Wolfram Weckwerth and Thomas Nägele (2015): Integrative molecular profiling indicates a central role of transitory starch breakdown in establishing a stable C/N homeostasis during cold acclimation in two natural accessions of Arabidopsis thaliana, BMC PLANT BIOLOGY 15, DOI: https://doi.org/10.1186/s12870-015-0668-1

Thomas Nägele, Arnd G. Heyer (2013): Approximating the subcellular organisation of carbohydrate metabolism during cold acclimation in different natural accessions of Arabidopsis thaliana. NEW PHYTOLOGIST, 198: 777–787. DOI: https://doi.org/10.1111/nph.12201

Nägele, T., Stutz, S., Hörmiller, I. I. and Heyer, A. G. (2012): Identification of a metabolic bottleneck for cold acclimation in Arabidopsis thaliana. THE PLANT JOURNAL 72(1), 102-114. DOI: https://doi.org/10.1111/j.1365-313X.2012.05064.x

Nägele, Thomas; Henkel, Sebastian; Hörmiller, Imke; Sauter, Thomas; Sawodny, Oliver; Ederer, Michael; Heyer, Arnd G. (2010): Mathematical modelling of the central carbohydrate metabolism in Arabidopsis thaliana reveals a substantial regulatory influence of vacuolar invertase on whole plant carbon metabolism. PLANT PHYSIOLOGY 153, 260–272. DOI: https://doi.org/10.1104/pp.110.154443